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Publications Archive - 2008

Babin, M., Roesler, C.S., and Cullen, J.J. (eds) - 2008 - Real-time coastal observing systems for marine ecosystem dynamics and harmful algal blooms: Theory, instrumentation and modelling - UNESCO, Paris. 861pp

Bard, S.M., B.R. Ruddick, and C.T. Taggart - 2008 - The flux of stuff: Developing an inexpensive and accurate method to track dispersion of environmental contaminants in aquatic ecosystems - Marine Environmental Research, 66, 187-189 (published abstract)

Berman-Frank, I., Chen, Y., Gao, Y., Fennel, K., Follows, M., Milligan, A., Falkowski, P.G. - 2008 - Chapter 35: Feedbacks between the Nitrogen, Carbon and Oxygen Cycles - In: Nitrogen in the Marine Environment, edited by Mulholland, M., Carpenter, E., Capone, D.,
Bronk, D. doi:10.1016/B978-0-12-372522-6.00035-9, p. 1537-1564

Berreville, O. F., A.F. Vezina, K.R. Thompson and B. Klien - 2008 - Integrated Analysis of Physical, Chemical and Ecological Interactions in Two Arctic polynyas - Canadian Journal of Fisheries and Aquatic Sciences, 65, 1036-1046

Boudreau, B.P. - 2008 - Nodule morphology and growth model - Proc. US National Academy Science 105, E21

Boudreau, B.P., Arnosti, C., and Jørgensen, B.B. - 2008 - Organic matter decay - Science 319, Technical Comment 1616b (see: www.sciencemag.org)

Bourgault, D., D.E. Kelley and P.S. Galbraith - 2008 - Turbulence and boluses on an internal beach - Journal of Marine Research, 66(5), 563-588

Bowlby HD, Hanson JM and Hutchings JA - 2008 - Stock structure and seasonal distribution pattern of American lobster, Homarus americanus, inferred through movement analysis - Fisheries Research, 90:279-288

Chabot D, Sainte-Marie B, Briand B and Hanson JM - 2008 - Atlantic cod and snow crab predator-prey relationship in the Gulf of St. Lawrence, Canada - Marine Ecology Progress Series 363:227-240

Claustre, H., Y Huot, I. Obernosterer, B. Gentili, D. Tailliez, and M. Lewis - 2008 - Gross community production and metabolic balance in the South Pacific Gyre, using a non-intrusive bio-optical method - Biogeosciences, 5, 463-474

Comeau, A.J., S.E. Craig, M. Babin, M. Lewis, F. Bruyant, and J.J. Cullen - 2008 - Temporal variations of photoacclimation - Ocean Optics, XIX. Proceedings of SPIE

Cullen, J.J. and P.W. Boyd - 2008 - Predicting and verifying the intended and unintended consequences of large-scale ocean fertilization - Marine Ecology Progress Series, 364: 295-301, doi:10.3354/meps07551

Cullen, J.J. - 2008 - Interactive comment on “Seaglider observations of variability in daytime fluorescence quenching of chlorophyll-a in Northeastern Pacific coastal waters” by B. S. Sackmann et al. - Biogeosciences Discuss., 5, S1481–S1491

Cullen, J.J. - 2008 - Observations and prediction of harmful algal blooms - p.1-41 in: Babin, M., Roesler, C.S., and Cullen, J.J. (eds), Real-time Coastal Observing Systems for Marine Ecosystem Dynamics and Harmful Algal Blooms: Theory, Instrumentation and Modelling. UNESCO, Paris.

Danielson, R. E., M. Dowd, and H. Ritchie - 2008 - Objective analysis of marine winds with the benefit of the Radarsat-1 synthetic aperture radar: A nonlinear regression framework - J. Geophys. Res., 113, C05019, doi:10.1029/2007JC004413

Dubois, N., P. Kindler, S. Spezzaferri, and C. Coric - 2008 - The initiation of the southern central Great Barrier Reef: New multiproxy data from Pleistocene distal sediments from the Marion Plateau (NE Australia) - Marine Geology, 250, 223-233

Elvin, S. and C.T. Taggart - 2008 - Right whales and vessels in Canadian waters - Marine Policy, 32, 379-386

Fennel, K. - 2008 - Widespread implementation of controlled upwelling in the North Pacific Subtropical Gyre would counteract diazotrophic N2 fixation - Marine Ecology Progress Series, 371:301-303, doi:10.3354/meps07772

Fennel, K., Wilkin, J., Previdi, M., Najjar, R. - 2008 - Denitrification effects on air-sea CO2 flux in the coastal ocean: Simulations for the northwest North Atlantic - Geophysical Research Letters, 35, L24608, doi:10.1029/2008GL036147

Fisher, J.A.D., K.T. Frank, W.C. Leggett, N.L. Shackell and B. Petrie - 2008 - Temporal dynamics within a contemporary latitudinal diversity gradient - Ecol. Lett., 11, 883-897 

Funck, T., Hansen, A.K., Reid, I.D. and Louden, K.E. - 2008 - The crustal structure of the Southern Nain and Makkovik Provinces of Labrador derived from seismic refraction data - Can. J. Earth. Sci., 45, 465-481

Galbraith, E.D., Kienast, M., Jaccard, S.L., Pedersen, T.F., Brunelle, B.G., Sigman, D.M., and Kiefer T. - 2008 - Consistent relationship between global climate and surface nitrate utilization in the western subarctic Pacific throughout the last 500 ka - Paleoceanography, 23, PA2212, doi: 10.1029/2007PA001518

Haeckel, M., Boudreau, B.P., and Wallmann, K. - 2008 - Bubble-induced porewater irrigation: A 3-D model for porewater mixing - Geochimica et Cosmochimica Acta 71, 5135-5154

Haidvogel, D.B., Arango, H., Budgell, W.P., Cornuelle, B.D., Curchitser, E., Di Lorenzo, E., Fennel, K., Geyer, W.R., Hermann, A.J., Lanerolle, L., Levin, J., McWilliams, J.C., Miller, A. J., Moore, A.M., Powell, T.M., Shchepetkin, A.F., Sherwood, C.R., Signell, R.P., Warner, J.C., Wilkin, J. - 2008 - Regional Ocean Forecasting in Terrain-following Coordinates: Model Formulation and Skill Assessment - Journal of Computational Physics, 227:3595–3624, doi:10.1016/j.jcp.2007.06.016

Hasegawa, D., H. Yamazaki, T. Ishimaru, H. Nagashima, and Y. Koike - 2008 - Apparent Phytoplankton Bloom due to Island Mass Effect - Journal of Marine Systems, 69, 238-246, doi:10.1016/j.jmarsys.2006.04.019

Hofmann, E., Druon, J.-N., Fennel, K., Friedrichs, M., Haidvogel, D., Lee, C., Mannino, A., McClain, C., Najjar, R., O'Reilly, J., Siewert, J., Pollard, D., Previdi, M., Seitzinger, S., Signorini, S., Wilkin, J. - 2008 - Eastern U.S. Continental Shelf Carbon Budget: Integrating Models, Data Assimilation, and Analysis - Oceanography, 21(1):32–50

Hu, J.T., and S.Y. Li - 2008 - One dimensional salinity and three dimensional baroclinic coupled model for simulating the flow in the Pearl River Delta, China - Journal of Hydraulic Engineering, 11, 1172-1184 (Chinese Version)

Jackson, H.R., Chian, D., Louden, K. and Salisbury, M. - 2008 - Crustal structure of the Meguma Terrane offshore of Nova Scotia and its tectonic implications - Can. J. Earth Sci. (submitted)

Kienast, M., Lehmann, M., Timmermann, A., Galbraith, E., Bolliet, T., Holbourn, A., Normandeau, C., and Laj, C. - 2008 - A mid-Holocene transition in the nitrogen dynamics of the western equatorial Pacific: Evidence of a deepening thermocline? - Geophysical Research Letters, 35, L23610, doi:10.1029/2008GL035464

Law, B.A., P.S Hill, T.G. Milligan, K.J. Curran, P.L. Wiberg and R.A. Wheatcroft - 2008 - Size sorting of fine-grained sediments during erosion: Results from the western Gulf of Lions - Continental Shelf Research, 28, 1935-1946, doi:10.1016/j.csr.2007.11.006 

Leggett W.C. and K.T. Frank - 2008 - Paradigms in fisheries oceanography - Oceanogr. Mar. Biol.: Ann. Rev., 46, 331-364

Lewis, M. - 2008 - The measurement of apparent optical properties for the diagnosis of harmful algal blooms - In: Babin, M., Roesler, C.S., and Cullen, J.J. (eds), Real-time Coastal Observing systems for Marine Ecosystem Dynamics and Harmful Algal Blooms: Theory, Instrumentation and Modelling. UNESCO, Paris, 207-236 

Li, W.K.W., M.R. Lewis, and W.G. Harrison - 2008 - Multiscalarity of the nutrient-chlorophyll relationship in coastal phytoplankton - Estuaries and Coasts, doi:10.1007/s12237-008-9119-7 

MacCracken, M., E. Escobar Briones, D. Gilbert, G. Korotaev, W. Naqvi, G. Perillo, T. Rixen, E. Stanev, H. Thomas, D. Unger and E. Urban - 2008 - Vulnerability of Semi-Enclosed Marine Systems to Environmental Disturbances - In: Urban E., Sundby B., Malanotte-Rizzoli, P. and  Melillo, J. (eds) Watersheds, Bays and Bounded Seas (SCOPE No. 70). Island Press, Washington, D. C., 9-30

Meysman, F.J.R., Malyuga, V.S., Boudreau, B.P., and Middelburg, J.J. - 2008 - A general stochastic approach to particle dispersal in soils and sediment - Geochimica et Cosmochimica Acta, 72, 3460-3478

Meysman, F.J.R., Malyuga, V.S., Boudreau, B.P., and Middelburg, J.J. - 2008 - Quantifying particle dispersal in aquatic sediments at short time scales: Model selection - Aquatic Biology 2, 239-254

Minshull, T.A., Louden, K.E. and Dean, S.M. - 2008 - Analysis of gas hydrate provinces by ocean bottom seismic methods - In: M. Riedel et al., eds., Gas Hydrates, Soc. Explor. Geophys. (accepted)

Mulligan, R.P., A.E. Hay, and A.J. Bowen - 2008 - Wave-driven circulation in a coastal bay during the landfall of a hurricane - J. Geophy.Res., 113, C05026, doi:10.1029/2007JC004500

Mulligan, R.P., A.J. Bowen, A.E. Hay, A.J. van der Westhuysen, and J.A. Battjes - 2008 - Whitecapping and wave field evolution in a coastal bay - J. Geophy.Res., 113, C03008, doi:10.1029/2007JC004382

Neuheimer, A.B., C.T. Taggart and K.T. Frank - 2008 - Size-at-age in haddock (Melanogrammus aeglefinus): Application of the growing degree day (GDD) metric - p.111-124 in: G.H. Kruse, K. Drinkwater, J.N. Ianelli, J.S. Link, D.L. Stram, V. Wespestad, and D. Woodby (eds.), Resiliancy of gadid stocks to fishing and climate change. Alaska Sea Grant College Program, AK-SG-08-01

Punshon, S. and R.M. Moore - 2008 - Aerobic hydrogen production and dinitrogen fixation in the marine cyanobacterium Trichodesmium erythraeum IMS 101 - Limnol. Oceanogr., 53(6), 2749-2753

Punshon, S., R.M. Moore - 2008 - Photochemical production of molecular hydrogen in lake water and coastal seawater - Marine Chemistry, 108, 215-220

Savenkoff C, Morissette L, Castonguay M, Swain DP, Hammill MO, Chabot D and Hanson JM - 2008 - Interactions between marine mammals and fisheries: Implications for cod recovery - Pages 107-151 In: Ecosystem Ecology Research Trends, J Chen and C Guo (eds), Nova Science Publishers Inc, New York

Schallenberg, C., M. R. Lewis, D. E. Kelley, and J. J. Cullen. - 2008 - Inferred influence of nutrient availability on the relationship between Sun-induced chlorophyll fluorescence and incident irradiance in the Bering Sea - J. Geophys. Res., 113, C07046, doi:10.1029/2007JC004355

Steinke, S., Kienast, M., Groeneveld, J., Lin, L.-C., Chen, M.-T., Rendle-Buhring, R. - 2008 - Proxy dependence of the temporal pattern of deglacial warming in the tropical South China Sea: Toward resolving seasonality - Quaternary Science Reviews, 27, 688-700

Stramski, D., R.A. Reynolds, M. Babin, S. Kaczmarek, M.R. Lewis, R. Rottgers, A. Sciandra, M. Stramska, M.S. Twardowski, and H. Claustre - 2008 - Relationships between the surface concentration of particulate organic carbon and optical properties in the eastern south pacific and eastern Atlantic oceans - Biogeosciences 5: 171-201

Swain DP, Sinclair AF and Hanson JM - 2008 - Evolution of growth in Gulf of St. Lawrence cod: Reply to Heino et al. - Proceedings of the Royal Society. B. Biological Sciences, 275:1113-1115

Thomas, H., A.E.F. Prowe, I.D. Lima, S.C. Doney, R. Wanninkhof, R.J. Greatbatch, U. Schuster, and A. Corbière - 2008 - Changes in the North Atlantic Oscillation influence CO2 uptake in the North Atlantic over the past 2 decades - Global Biogeochemical Cycles, 22, GB4027, doi:10.1029/2007GB003167

Thomas, H., D. Unger, J. Zhang, K.K. Liu and E.H. Shadwick - 2008 - Biogeochemical cycling in semi-enclosed marine systems and continental margins - In: Urban E., Sundby B., Malanotte-Rizzoli, P. and  Melillo, J. (eds) Watersheds, Bays and Bounded Seas (SCOPE No. 70). Island Press, Washington, D. C., 169-190

Vanderlaan, A.S.M., C.T. Taggart, A.R. Serdynska, R.D. Kenney, and M.W. Brown - 2008 - Reducing the risk of lethal encounters: vessels and right whales in the Bay of Fundy and on the Scotian Shelf - Endangered Species Research, 4, 283-297

Voutier JL and Hanson JM - 2008 - Abundance, distribution, and feeding of lady crab in the southern Gulf of St. Lawrence - Aquatic Ecology 42:43-60

Zhai, L. and J. Sheng - 2008 - Improve the utility of a coastal circulation model by assimilating hydrographic observations into the model momentum equation - Geophysical Research Letters, 35, L24603, doi:10.1029/2008GL035640

Zhai, L. and J. Sheng - 2008 - Assimilating hydrographic observations into a nested-grid circulation model in Lunenburg Bay of Nova Scotia - Estuarine and Coastal Modeling, 274-290

Zhai, L., J. Sheng, and R. J. Greatbatch - 2008 - Application of a nested-grid ocean circulation model to Lunenburg Bay of Nova Scotia: Verification against observations - Journal of Geophysical Research-Oceans, 113, C02024, doi:10.1029/2007JC004230

Zhai, L., T. Platt, C. Tang, M. Dowd, S. Sathyendranath, and M. H. Forget - 2008 - Estimation of phytoplankton loss rate by remote sensing - Geophysical Research Letters, 35, L23606, doi.10.1029/2008GL035666

Zhai, L., J. Sheng, and R. J. Greatbatch - 2008 - Baroclinic dynamics of wind-driven circulation in a stratified bay: A numerical study using models of varying complexity - Continental Shelf Research, doi:10.1016/j.csr.2008.05.005